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IntAct - annotates human variants which fall in interaction sites, as described in the IntAct database.GO - retrieves Gene Ontology terms associated with transcripts/translations.Plugins now available in REST and web (already available in CLI):.EVE - annotates human variants using EVA classification method based solely on evolutionary sequences (GRCh38 only).IntAct - 4 new species are now supported - rat, chicken (red jungle fowl), yeast, and arabidopsis.mutfunc - predicts destabilization of protein structure, interaction and others features by a variant (GRCh38 only).New plugin (supported on CLI, REST, and web):.Download version 2.0 (Ensembl 62 - ensembl-variation/scripts/examples).Download version 2.2 (Ensembl 64 - ensembl-tools/scripts/variant_effect_predictor).The following downloads are available for archival purposes. Previously VEP was available as part of the ensembl-tools package (see the Ensembl archive site for documentation). Users without the git utility installed may download a zip file from GitHub, though we would always recommend using git if possible. To use an older version (this example shows how to set up release 87): cd ensembl-vep

To update from a previous version: cd ensembl-vep Use git to download the ensembl-vep package: git clone Variant Effect Predictor Download and install Downloadĭownload ensembl-vep package (see below the different ways to download it) and then follow the installation instructions.